Class returned by bm_ModelingOptions (a
list of BIOMOD.options.dataset more exactly), and used by
BIOMOD_Modeling
# S4 method for character,character
BIOMOD.options.default(mod, typ, pkg, fun)a character corresponding to the model name to be computed, must be either
ANN, CTA, FDA, GAM, GBM, GLM, MARS,
MAXENT, MAXNET, RF, SRE, XGBOOST
a character corresponding to the data type to be used, must be either
binary, binary.PA, abundance, compositional
a character corresponding to the package containing
the model function to be called
a character corresponding to the model function name
to be called
modela character corresponding to the model
typea character corresponding to the data type
(binary, binary.PA, abundance, compositional)
packagea character corresponding to the package containing
the model function to be called
funca character corresponding to the model function name
to be called
args.namesa vector containing character corresponding
to the model function arguments
args.defaulta list containing for each dataset the default
values for all arguments listed in args.names
BIOMOD.options.dataset, bm_ModelingOptions,
bm_Tuning, BIOMOD_Modeling, bm_RunModelsLoop
Other Toolbox objects:
BIOMOD.ensemble.models.out,
BIOMOD.formated.data,
BIOMOD.formated.data.PA,
BIOMOD.models.options,
BIOMOD.models.out,
BIOMOD.options.dataset,
BIOMOD.projection.out,
BIOMOD.stored.data,
biomod2_ensemble_model,
biomod2_model
showClass("BIOMOD.options.default")